EnhancerDB
  1. Home
  2. SNP
  3. rs202007556[chr17:38678885]
Enhancers that have rs202007556[chr17:38678885]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs202007556[chr17:38678885]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38678613 38679077 TCF7L2 GTRD no Colon (HCT116) 21754960
chr17 38678613 38679077 TCF7L2 GTRD no Colon (HCT116) 108255562
chr17 38678816 38679273 ZNF274 GTRD no Liver (HepG2) 21754961
chr17 38678881 38678885 H1TF2 TRANSFAC yes 54221107
chr17 38678881 38678885 NFE TRANSFAC yes 54221108
chr17 38678881 38678885 SRF TRANSFAC yes 54221109
Genes associated with rs202007556[chr17:38678885], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More