EnhancerDB
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  3. rs202048035[chr5:171420616]
Enhancers that have rs202048035[chr5:171420616]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171406325 171422095 enh38666
Skin (Keratinocyte) Prostate (PC-3) Esophagus Astrocyte Blood (GM12878) Stomach Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs202048035[chr5:171420616]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171420614 171420635 IRF1 JASPAR yes 67756025
chr5 171420615 171420630 FOXP1 JASPAR yes 67756026
chr5 171420615 171420636 IRF1 JASPAR yes 67756027
Genes associated with rs202048035[chr5:171420616], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More