EnhancerDB
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  3. rs202051823[chr17:57928082]
Enhancers that have rs202051823[chr17:57928082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57915645 57936791 enh17263
Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs202051823[chr17:57928082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57924302 57928498 ZNF143 GTRD no Epithelial (MCF-7) 21776758
chr17 57924302 57928498 ZNF143 GTRD no Epithelial (MCF-7) 108278390
chr17 57926367 57928424 ZNF143 GTRD no Epithelial (MCF-7) 21776803
chr17 57926512 57928384 ZNF143 GTRD no Epithelial (MCF-7) 21776806
chr17 57926746 57928364 ZNF143 GTRD no Epithelial (MCF-7) 21776810
chr17 57926756 57928337 ZNF143 GTRD no Epithelial (MCF-7) 21776812
chr17 57926862 57928480 ZNF143 GTRD no Epithelial (MCF-7) 21776818
chr17 57927034 57928314 ZNF143 GTRD no Epithelial (MCF-7) 21776823
chr17 57927071 57928248 ZNF143 GTRD no Epithelial (MCF-7) 21776824
chr17 57927628 57928109 ZNF274 GTRD no Liver (HepG2) 21776836
chr17 57927968 57928185 ZNF274 GTRD no Liver (HepG2) 21776837
chr17 57928061 57928082 IRF1 JASPAR yes 55088922
chr17 57928068 57928089 IRF1 JASPAR yes 55088925
chr17 57928070 57928091 IRF1 JASPAR yes 55088926
chr17 57928074 57928095 IRF1 JASPAR yes 55088927
chr17 57928075 57928096 ZNF263 JASPAR yes 55088928
chr17 57928076 57928097 IRF1 JASPAR yes 55088929
chr17 57928078 57928099 ZNF263 JASPAR yes 55088930
chr17 57928080 57928095 PRDM1 JASPAR yes 55088931
chr17 57928081 57928102 ZNF263 JASPAR yes 55088932
chr17 57928082 57928103 IRF1 JASPAR yes 55088933
Genes associated with rs202051823[chr17:57928082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More