EnhancerDB
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  3. rs202140339[chr15:41545624]
Enhancers that have rs202140339[chr15:41545624]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 41539463 41554335 enh3544
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Lung Blood (OCI-LY7) Stomach Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Heart
Transcript factors that have rs202140339[chr15:41545624]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 41545618 41545630 FOXI1 JASPAR yes 22978737
chr15 41545619 41545631 FOXC2 JASPAR yes 22978738
chr15 41545619 41545633 ONECUT3 JASPAR yes 22978739
chr15 41545620 41545631 FOXB1 JASPAR yes 22978740
chr15 41545620 41545631 FOXC1 JASPAR yes 22978741
chr15 41545620 41545636 POU4F2 JASPAR yes 22978742
chr15 41545620 41545636 POU4F3 JASPAR yes 22978743
chr15 41545621 41545625 YY1 TRANSFAC yes 22978744
chr15 41545621 41545636 FOXA1 JASPAR yes 22978745
chr15 41545622 41545634 FOXI1 JASPAR yes 22978746
chr15 41545622 41545636 POU4F1 JASPAR yes 22978747
chr15 41545622 41545637 FOXP1 JASPAR yes 22978748
chr15 41545622 41545637 HNF1A JASPAR yes 22978749
chr15 41545623 41545635 FOXC2 JASPAR yes 22978750
chr15 41545623 41545637 ONECUT2 JASPAR yes 22978751
chr15 41545623 41545637 ONECUT3 JASPAR yes 22978752
chr15 41545624 41545635 FOXB1 JASPAR yes 22978753
chr15 41545624 41545635 FOXC1 JASPAR yes 22978754
chr15 41545624 41545635 PROP1 JASPAR yes 22978755
chr15 41545624 41545640 POU4F2 JASPAR yes 22978756
chr15 41545624 41545640 POU4F3 JASPAR yes 22978757
Genes associated with rs202140339[chr15:41545624], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More