EnhancerDB
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  3. rs202145492[chr1:8972829]
Enhancers that have rs202145492[chr1:8972829]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8954605 8983075 enh11478
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs202145492[chr1:8972829]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8972817 8972831 ONECUT1 JASPAR yes 26608049
chr1 8972817 8972831 ONECUT2 JASPAR yes 26608050
chr1 8972817 8972831 ONECUT3 JASPAR yes 26608051
chr1 8972820 8972830 CUX1 JASPAR yes 26608052
chr1 8972820 8972830 CUX2 JASPAR yes 26608053
chr1 8972820 8972830 PAX3 JASPAR yes 26608054
chr1 8972820 8972830 PAX7 JASPAR yes 26608055
chr1 8972822 8972832 GSX2 JASPAR yes 26608056
chr1 8972822 8972832 LBX2 JASPAR yes 26608057
chr1 8972822 8972832 MIXL1 JASPAR yes 26608058
chr1 8972822 8972832 MNX1 JASPAR yes 26608059
chr1 8972822 8972832 RAX JASPAR yes 26608060
chr1 8972823 8972831 ISX JASPAR yes 26608061
chr1 8972823 8972831 LHX9 JASPAR yes 26608062
chr1 8972823 8972831 LMX1B JASPAR yes 26608063
chr1 8972823 8972831 PRRX1 JASPAR yes 26608064
chr1 8972823 8972831 RAX2 JASPAR yes 26608065
chr1 8972823 8972831 SHOX JASPAR yes 26608066
chr1 8972823 8972831 UNCX JASPAR yes 26608067
chr1 8972824 8972839 FOXP1 JASPAR yes 26608068
chr1 8972824 8972845 IRF1 JASPAR yes 26608069
chr1 8972826 8972841 FOXP1 JASPAR yes 26608070
chr1 8972827 8972842 FOXP1 JASPAR yes 26608071
chr1 8972828 8972834 TBP TRANSFAC yes 26608072
chr1 8972828 8972843 FOXP1 JASPAR yes 26608073
chr1 8972828 8972849 IRF1 JASPAR yes 26608074
chr1 8972829 8972844 FOXP1 JASPAR yes 26608075
chr1 8972829 8972850 IRF1 JASPAR yes 26608076
Genes associated with rs202145492[chr1:8972829], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More