EnhancerDB
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Enhancers that have rs202147338[chr19:2573016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs202147338[chr19:2573016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2573011 2573032 IRF1 JASPAR yes 112076822
chr19 2573012 2573033 IRF1 JASPAR yes 112076823
chr19 2573013 2573034 IRF1 JASPAR yes 112076824
chr19 2573014 2573035 IRF1 JASPAR yes 112076825
chr19 2573015 2573030 FOXP1 JASPAR yes 112076826
chr19 2573015 2573036 IRF1 JASPAR yes 112076827
chr19 2573016 2573031 FOXP1 JASPAR yes 112076828
chr19 2573016 2573037 IRF1 JASPAR yes 112076829
Genes associated with rs202147338[chr19:2573016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More