EnhancerDB
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  3. rs202147788[chr17:25887420]
Enhancers that have rs202147788[chr17:25887420]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25884725 25904399 enh17065
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs202147788[chr17:25887420]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25887412 25887427 RUNX2 JASPAR yes 53645678
chr17 25887413 25887426 SCRT2 JASPAR yes 53645679
chr17 25887413 25887428 SCRT1 JASPAR yes 53645680
Genes associated with rs202147788[chr17:25887420], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More