EnhancerDB
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  3. rs2024878[chr1:231528415]
Enhancers that have rs2024878[chr1:231528415]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2024878[chr1:231528415]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231528404 231528418 FOXF2 JASPAR yes 36088548
chr1 231528404 231528419 FOXP1 JASPAR yes 36088549
chr1 231528406 231528418 FOXC2 JASPAR yes 36088550
chr1 231528407 231528418 FOXP2 JASPAR yes 36088552
chr1 231528409 231528417 FOXG1 JASPAR yes 36088553
chr1 231528409 231528417 FOXO3 JASPAR yes 36088554
chr1 231528409 231528418 SRY JASPAR yes 36088555
chr1 231528411 231528420 SOX9 JASPAR yes 36088556
Genes associated with rs2024878[chr1:231528415], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More