EnhancerDB
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Enhancers that have rs2035488[chr16:85456656]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85446773 85473775 enh16869
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Pancreas Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs2035488[chr16:85456656]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 21725378
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 108214476
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 108214477
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 21725385
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 108214478
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 108214479
chr16 85454868 85457486 TCF7L2 GTRD no Colon (HCT116) 21725460
chr16 85454868 85457486 TCF7L2 GTRD no Colon (HCT116) 108214481
chr16 85455014 85458001 ZNF143 GTRD no Epithelial (MCF-7) 21725461
chr16 85455014 85458001 ZNF143 GTRD no Epithelial (MCF-7) 108214482
chr16 85455373 85456675 ZNF274 GTRD no Bone Marrow (K562) 21725463
chr16 85455373 85456675 ZNF274 GTRD no Bone Marrow (K562) 108214483
chr16 85455482 85456778 TCF7L2 GTRD no Colon (HCT116) 21725469
chr16 85455482 85456778 TCF7L2 GTRD no Colon (HCT116) 108214485
chr16 85455482 85457011 TCF7L2 GTRD no Colon (HCT116) 21725470
chr16 85455482 85457011 TCF7L2 GTRD no Colon (HCT116) 108214486
chr16 85455982 85460115 ZNF143 GTRD no Epithelial (MCF-7) 21725474
chr16 85455982 85460115 ZNF143 GTRD no Epithelial (MCF-7) 108214489
chr16 85455982 85460115 ZNF143 GTRD no Epithelial (MCF-7) 108214490
chr16 85456030 85465681 ZNF143 GTRD no Epithelial (MCF-7) 21725475
chr16 85456030 85465681 ZNF143 GTRD no Epithelial (MCF-7) 108214491
chr16 85456030 85465681 ZNF143 GTRD no Epithelial (MCF-7) 108214492
chr16 85456131 85457970 ZNF143 GTRD no Epithelial (MCF-7) 21725477
chr16 85456131 85457970 ZNF143 GTRD no Epithelial (MCF-7) 108214495
chr16 85456138 85456794 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21725478
chr16 85456138 85456794 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108214496
chr16 85456173 85460386 ZNF143 GTRD no Epithelial (MCF-7) 21725479
chr16 85456173 85460386 ZNF143 GTRD no Epithelial (MCF-7) 108214497
chr16 85456173 85460386 ZNF143 GTRD no Epithelial (MCF-7) 108214498
chr16 85456229 85456728 ZNF274 GTRD no Bone Marrow (K562) 21725481
chr16 85456229 85456728 ZNF274 GTRD no Bone Marrow (K562) 108214503
chr16 85456242 85456858 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214506
chr16 85456268 85456838 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21725484
chr16 85456268 85456838 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108214510
chr16 85456279 85456823 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214512
chr16 85456287 85456663 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214515
chr16 85456304 85456760 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214516
chr16 85456324 85456764 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214517
chr16 85456327 85456749 ZNF274 GTRD no Bone Marrow (K562) 21725486
chr16 85456327 85456749 ZNF274 GTRD no Bone Marrow (K562) 108214518
chr16 85456329 85459541 ZNF143 GTRD no Epithelial (MCF-7) 21725487
chr16 85456329 85459541 ZNF143 GTRD no Epithelial (MCF-7) 108214519
chr16 85456329 85459541 ZNF143 GTRD no Epithelial (MCF-7) 108214520
chr16 85456332 85456732 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214521
chr16 85456338 85456902 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214522
chr16 85456357 85456687 EP300 UCSC Txn Factor no Conserved 108214524
chr16 85456362 85456702 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214525
chr16 85456385 85456855 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21725489
chr16 85456385 85456855 GATA3 UCSC Txn Factor no Conserved 108214526
chr16 85456385 85456855 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108214527
chr16 85456392 85456692 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214528
chr16 85456400 85456676 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214529
chr16 85456402 85456692 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214530
chr16 85456417 85456677 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214531
chr16 85456420 85456716 FOXA1 UCSC Txn Factor no Conserved 108214533
chr16 85456429 85456712 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214534
chr16 85456430 85456680 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214535
chr16 85456433 85456693 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214537
chr16 85456436 85456908 TCF7L2 GTRD no Colon (HCT116) 21725491
chr16 85456436 85456908 TCF7L2 GTRD no Colon (HCT116) 108214538
chr16 85456443 85456704 FOXA2 UCSC Txn Factor no Conserved 108214539
chr16 85456443 85456704 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214540
chr16 85456447 85456668 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214541
chr16 85456450 85456700 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108214542
chr16 85456526 85456836 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21725492
chr16 85456526 85456836 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108214546
chr16 85456620 85466869 ZNF143 GTRD no Epithelial (MCF-7) 21725493
chr16 85456620 85466869 ZNF143 GTRD no Epithelial (MCF-7) 108214547
chr16 85456646 85456665 PAX5 JASPAR yes 12059364
chr16 85456651 85456671 ESR1 JASPAR yes 12059365
chr16 85456654 85456672 ESR1 JASPAR yes 12059366
chr16 85456656 85456671 ESR2 JASPAR yes 12059367
chr16 85456656 85456676 ESR1 JASPAR yes 12059368
Genes associated with rs2035488[chr16:85456656], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More