EnhancerDB
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  3. rs2038117[chr1:12602900]
Enhancers that have rs2038117[chr1:12602900]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12597605 12619763 enh11515
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs2038117[chr1:12602900]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12592297 12605478 ZBTB33 GTRD no Lung (A549) 107802124
chr1 12592297 12605478 ZBTB33 GTRD no Lung (A549) 107802125
chr1 12602882 12602902 RREB1 JASPAR yes 26831261
chr1 12602885 12602905 RREB1 JASPAR yes 26831262
chr1 12602886 12602906 RREB1 JASPAR yes 26831263
chr1 12602887 12602901 GLIS2 JASPAR yes 26831264
chr1 12602887 12602901 GLIS3 JASPAR yes 26831265
chr1 12602887 12602907 RREB1 JASPAR yes 26831266
chr1 12602887 12602908 ZNF263 JASPAR yes 26831267
chr1 12602889 12602909 RREB1 JASPAR yes 26831268
chr1 12602890 12602910 RREB1 JASPAR yes 26831271
chr1 12602892 12602912 RREB1 JASPAR yes 26831272
chr1 12602893 12602903 SP1 JASPAR yes 26831273
chr1 12602893 12602913 RREB1 JASPAR yes 26831274
chr1 12602894 12602915 ZNF263 JASPAR yes 26831275
chr1 12602895 12602915 RREB1 JASPAR yes 26831276
chr1 12602896 12602916 RREB1 JASPAR yes 26831277
chr1 12602897 12602917 RREB1 JASPAR yes 26831278
chr1 12602897 12602918 ZNF263 JASPAR yes 26831279
chr1 12602898 12602918 RREB1 JASPAR yes 26831280
chr1 12602900 12602905 SP1 TRANSFAC yes 26831281
chr1 12602900 12602910 ZNF740 JASPAR yes 26831282
chr1 12602900 12602920 RREB1 JASPAR yes 26831283
Genes associated with rs2038117[chr1:12602900], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More