EnhancerDB
  1. Home
  2. SNP
  3. rs2046953[chr3:119864113]
Enhancers that have rs2046953[chr3:119864113]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 119860605 119883439 enh7479
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs2046953[chr3:119864113]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 119864108 119864123 FOXP1 JASPAR yes 5196145
chr3 119864109 119864130 IRF1 JASPAR yes 5196146
chr3 119864113 119864125 IRF1 JASPAR yes 5196147
Genes associated with rs2046953[chr3:119864113], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More