EnhancerDB
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  3. rs2052489[chr5:149177922]
Enhancers that have rs2052489[chr5:149177922]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149167853 149192675 enh8796
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2052489[chr5:149177922]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149177909 149177930 IRF1 JASPAR yes 66846216
chr5 149177912 149177926 SPI1 JASPAR yes 66846217
chr5 149177915 149177930 FOXP1 JASPAR yes 66846218
chr5 149177915 149177930 MEF2C JASPAR yes 66846219
chr5 149177916 149177927 FOXP2 JASPAR yes 66846220
chr5 149177916 149177928 MEF2A JASPAR yes 66846221
Genes associated with rs2052489[chr5:149177922], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More