EnhancerDB
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  3. rs2053508[chr17:73685659]
Enhancers that have rs2053508[chr17:73685659]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 73668800 73695855 enh17379
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 73685500 73685825 vista25989
VISTA
Transcript factors that have rs2053508[chr17:73685659]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 73685495 73686015 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21788051
chr17 73685495 73686015 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108294448
chr17 73685543 73685913 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21788052
chr17 73685543 73685913 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108294449
chr17 73685630 73685950 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21788053
chr17 73685630 73685950 E2F4 UCSC Txn Factor no Conserved 108294450
chr17 73685630 73685950 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108294451
chr17 73685635 73685939 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21788054
chr17 73685635 73685939 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108294452
chr17 73685656 73685916 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21788055
chr17 73685656 73685916 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108294453
chr17 73685659 73685674 TFAP2A JASPAR yes 21296725
chr17 73685659 73685674 TFAP2A JASPAR yes 55967518
Genes associated with rs2053508[chr17:73685659], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More