EnhancerDB
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  3. rs2078389[chr1:225956883]
Enhancers that have rs2078389[chr1:225956883]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2078389[chr1:225956883]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225956334 225956904 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21385854
chr1 225956632 225957288 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21385866
chr1 225956675 225957145 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21385867
chr1 225956768 225956960 ZNF274 GTRD no Liver (HepG2) 21385868
chr1 225956865 225956883 NFYA JASPAR yes 35769859
chr1 225956871 225956886 NFYB JASPAR yes 35769880
chr1 225956883 225956888 H4TF1 TRANSFAC yes 35769883
Genes associated with rs2078389[chr1:225956883], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More