EnhancerDB
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  3. rs2089729[chr16:14465671]
Enhancers that have rs2089729[chr16:14465671]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 14436207 14505799 enh3905
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs2089729[chr16:14465671]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 14465620 14465913 ZNF143 GTRD no Epithelial (MCF-7) 21692854
chr16 14465663 14465677 IRF7 JASPAR yes 9690304
chr16 14465665 14465677 IRF1 JASPAR yes 9690305
chr16 14465667 14465688 IRF1 JASPAR yes 9690306
chr16 14465669 14465684 IRF9 JASPAR yes 9690307
chr16 14465671 14465685 STAT1 JASPAR yes 9690308
chr16 14465671 14465686 STAT2 JASPAR yes 9690309
chr16 14465671 14465689 IRF2 JASPAR yes 9690310
Genes associated with rs2089729[chr16:14465671], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More