EnhancerDB
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  3. rs2119481[chr6:13422404]
Enhancers that have rs2119481[chr6:13422404]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13417125 13443009 enh8962
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs2119481[chr6:13422404]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13422398 13422416 SRF JASPAR yes 100028793
chr6 13422399 13422406 NFATC2 JASPAR yes 100028794
chr6 13422402 13422412 ALX3 JASPAR yes 100028795
chr6 13422402 13422412 LBX2 JASPAR yes 100028796
chr6 13422402 13422412 MIXL1 JASPAR yes 100028797
chr6 13422403 13422407 H1TF2 TRANSFAC yes 100028798
chr6 13422403 13422407 NFE TRANSFAC yes 100028799
chr6 13422403 13422407 SRF TRANSFAC yes 100028800
chr6 13422403 13422411 BARX1 JASPAR yes 100028801
chr6 13422403 13422411 BSX JASPAR yes 100028802
chr6 13422403 13422411 DLX6 JASPAR yes 100028803
chr6 13422403 13422411 ISX JASPAR yes 100028804
chr6 13422403 13422411 LBX1 JASPAR yes 100028805
chr6 13422403 13422411 LHX9 JASPAR yes 100028806
chr6 13422403 13422411 MSX1 JASPAR yes 100028807
chr6 13422403 13422411 MSX2 JASPAR yes 100028808
chr6 13422403 13422411 NKX6-2 JASPAR yes 100028809
chr6 13422403 13422411 PRRX1 JASPAR yes 100028810
chr6 13422403 13422411 RAX2 JASPAR yes 100028811
chr6 13422403 13422411 SHOX JASPAR yes 100028812
chr6 13422403 13422411 UNCX JASPAR yes 100028813
Genes associated with rs2119481[chr6:13422404], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More