EnhancerDB
  1. Home
  2. SNP
  3. rs2120977[chr1:208361837]
Enhancers that have rs2120977[chr1:208361837]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 208343485 208368555 enh12612
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs2120977[chr1:208361837]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208361824 208361837 NFKB1 JASPAR yes 34905107
chr1 208361827 208361844 RARA JASPAR yes 34905108
chr1 208361829 208361840 USF1 JASPAR yes 34905109
chr1 208361829 208361840 USF2 JASPAR yes 34905110
chr1 208361830 208361840 SREBF2 JASPAR yes 34905111
chr1 208361832 208361837 USF2 TRANSFAC yes 34905112
chr1 208361836 208361844 CREB1 JASPAR yes 34905113
chr1 208361837 208361855 RARA JASPAR yes 34905114
Genes associated with rs2120977[chr1:208361837], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More