EnhancerDB
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  3. rs212520[chr1:21580027]
Enhancers that have rs212520[chr1:21580027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21572485 21581129 enh11590
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Uterus Heart
Transcript factors that have rs212520[chr1:21580027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21580015 21580029 PLAG1 JASPAR yes 27287592
chr1 21580022 21580027 SP1 TRANSFAC yes 27287593
chr1 21580023 21580028 SP1 TRANSFAC yes 27287594
chr1 21580026 21580030 LFA1 TRANSFAC yes 27287595
Genes associated with rs212520[chr1:21580027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More