EnhancerDB
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Enhancers that have rs212531[chr1:21588278]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21585105 21605175 enh26575
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Liver (HepG2) Prostate (RWPE1) Heart
chr1 21588176 21588724 vista662
VISTA
Transcript factors that have rs212531[chr1:21588278]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21586237 21589119 TCF7L2 GTRD no Colon (HCT116) 21325274
chr1 21586237 21589119 TCF7L2 GTRD no Colon (HCT116) 107802345
chr1 21586237 21589119 TCF7L2 GTRD no Colon (HCT116) 107802346
chr1 21588257 21588278 ZNF263 JASPAR yes 27288124
chr1 21588257 21588278 ZNF263 JASPAR yes 118245409
chr1 21588258 21588279 ZNF263 JASPAR yes 27288125
chr1 21588258 21588279 ZNF263 JASPAR yes 118245410
chr1 21588275 21588294 CTCF JASPAR yes 27288129
chr1 21588275 21588294 CTCF JASPAR yes 118245414
chr1 21588277 21588288 EBF1 JASPAR yes 27288130
chr1 21588277 21588288 EBF1 JASPAR yes 118245415
Genes associated with rs212531[chr1:21588278], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More