EnhancerDB
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  3. rs2140224[chr17:25800562]
Enhancers that have rs2140224[chr17:25800562]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25791425 25838215 enh17063
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2140224[chr17:25800562]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25799751 25801696 POLR2A UCSC Txn Factor no Conserved 108245510
chr17 25800435 25801095 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21747984
chr17 25800435 25801095 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245511
chr17 25800441 25801071 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21747985
chr17 25800441 25801071 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245512
chr17 25800477 25800781 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747986
chr17 25800477 25800781 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245513
chr17 25800481 25801071 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21747987
chr17 25800481 25801071 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245514
chr17 25800496 25801020 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747988
chr17 25800496 25801020 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245515
chr17 25800505 25801025 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21747989
chr17 25800505 25801025 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245516
chr17 25800531 25800911 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21747990
chr17 25800531 25800911 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245517
chr17 25800543 25800923 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21747991
chr17 25800543 25800923 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245518
chr17 25800544 25801060 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21747992
chr17 25800544 25801060 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245519
chr17 25800548 25801068 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21747993
chr17 25800548 25801068 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245520
chr17 25800552 25800565 TFAP2A JASPAR yes 53633879
chr17 25800552 25800565 TFAP2B JASPAR yes 53633880
chr17 25800552 25800565 TFAP2C JASPAR yes 53633881
chr17 25800555 25801151 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21747994
chr17 25800555 25801151 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245521
Genes associated with rs2140224[chr17:25800562], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More