EnhancerDB
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  3. rs2173013[chr5:78051223]
Enhancers that have rs2173013[chr5:78051223]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78038905 78058872 enh8512
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs2173013[chr5:78051223]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78051215 78051225 FIGLA JASPAR yes 63622074
chr5 78051215 78051225 TCF3 JASPAR yes 63622075
chr5 78051216 78051225 SNAI2 JASPAR yes 63622076
Genes associated with rs2173013[chr5:78051223], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More