EnhancerDB
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  3. rs221026[chr1:16522456]
Enhancers that have rs221026[chr1:16522456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs221026[chr1:16522456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16522447 16522463 T JASPAR yes 27034776
chr1 16522451 16522459 TBX5 JASPAR yes 27034777
chr1 16522451 16522460 ZEB1 JASPAR yes 27034778
chr1 16522451 16522464 ZBTB18 JASPAR yes 27034779
chr1 16522452 16522462 FIGLA JASPAR yes 27034780
chr1 16522452 16522462 ID4 JASPAR yes 27034781
chr1 16522452 16522462 TCF3 JASPAR yes 27034782
chr1 16522452 16522462 TCF4 JASPAR yes 27034783
chr1 16522453 16522462 SNAI2 JASPAR yes 27034784
chr1 16522454 16522459 USF2 TRANSFAC yes 27034785
Genes associated with rs221026[chr1:16522456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More