EnhancerDB
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  3. rs2219796[chr10:27071300]
Enhancers that have rs2219796[chr10:27071300]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 27066185 27084275 enh1143
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Pancreas (Panc1) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs2219796[chr10:27071300]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 27071282 27071302 RREB1 JASPAR yes 126161329
chr10 27071290 27071310 RREB1 JASPAR yes 126161330
chr10 27071293 27071308 FOXP1 JASPAR yes 126161331
chr10 27071293 27071313 RREB1 JASPAR yes 126161332
chr10 27071293 27071314 IRF1 JASPAR yes 126161333
chr10 27071297 27071312 STAT2 JASPAR yes 126161334
Genes associated with rs2219796[chr10:27071300], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More