EnhancerDB
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  3. rs2236020[chr6:107191289]
Enhancers that have rs2236020[chr6:107191289]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 107161265 107207435 enh9283
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Liver Blood (OCI-LY7) Lung (A549) Stomach Muscle (A673) Placenta Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs2236020[chr6:107191289]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 107191285 107191297 PKNOX1 JASPAR yes 104065130
chr6 107191285 107191297 PKNOX2 JASPAR yes 104065131
chr6 107191285 107191297 TGIF2 JASPAR yes 104065132
chr6 107191288 107191298 TBX21 JASPAR yes 104065133
chr6 107191288 107191299 TBX20 JASPAR yes 104065134
chr6 107191288 107191299 TBX2 JASPAR yes 104065135
chr6 107191288 107191301 EOMES JASPAR yes 104065136
chr6 107191289 107191297 TBX15 JASPAR yes 104065137
chr6 107191289 107191297 TBX1 JASPAR yes 104065138
chr6 107191289 107191297 TBX4 JASPAR yes 104065139
chr6 107191289 107191297 TBX5 JASPAR yes 104065140
chr6 107191289 107191299 TBR1 JASPAR yes 104065141
Genes associated with rs2236020[chr6:107191289], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More