EnhancerDB
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  3. rs2246272[chr1:17899309]
Enhancers that have rs2246272[chr1:17899309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs2246272[chr1:17899309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17899304 17899324 ESR1 JASPAR yes 27103466
chr1 17899307 17899325 ESR1 JASPAR yes 27103467
chr1 17899308 17899325 ESR1 JASPAR yes 27103468
chr1 17899308 17899326 ESR2 JASPAR yes 27103469
chr1 17899309 17899324 ESR2 JASPAR yes 27103470
chr1 17899309 17899329 ESR1 JASPAR yes 27103471
Genes associated with rs2246272[chr1:17899309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More