EnhancerDB
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  3. rs2248649[chr1:231527805]
Enhancers that have rs2248649[chr1:231527805]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2248649[chr1:231527805]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231527793 231527807 PLAG1 JASPAR yes 36088452
chr1 231527800 231527805 SP1 TRANSFAC yes 36088453
chr1 231527801 231527806 SP1 TRANSFAC yes 36088454
chr1 231527804 231527809 SP1 TRANSFAC yes 36088455
Genes associated with rs2248649[chr1:231527805], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More