EnhancerDB
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  3. rs2248666[chr1:178620601]
Enhancers that have rs2248666[chr1:178620601]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs2248666[chr1:178620601]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178620483 178621764 ZNF274 GTRD no Liver (HepG2) 21352790
chr1 178620538 178622318 ZNF274 GTRD no Liver (HepG2) 21352791
chr1 178620541 178621172 ZNF274 GTRD no Liver (HepG2) 21352792
chr1 178620555 178621494 ZNF274 GTRD no Liver (HepG2) 21352793
chr1 178620555 178621530 ZNF274 GTRD no Liver (HepG2) 21352794
chr1 178620573 178621755 ZNF274 GTRD no Liver (HepG2) 21352795
chr1 178620588 178621184 ZNF274 GTRD no Liver (HepG2) 21352796
chr1 178620589 178620601 NHLH1 JASPAR yes 33433647
chr1 178620596 178620607 NFE2L2 JASPAR yes 33433649
chr1 178620597 178622210 ZNF274 GTRD no Liver (HepG2) 21352797
chr1 178620598 178620612 STAT1 JASPAR yes 33433650
chr1 178620598 178620616 ESR2 JASPAR yes 33433651
chr1 178620599 178620611 IRF1 JASPAR yes 33433652
chr1 178620600 178620620 ESR1 JASPAR yes 33433653
Genes associated with rs2248666[chr1:178620601], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More