EnhancerDB
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  3. rs2252238[chr12:46941907]
Enhancers that have rs2252238[chr12:46941907]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46935165 46958895 enh14680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs2252238[chr12:46941907]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46941510 46942160 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542289
chr12 46941585 46941961 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542291
chr12 46941624 46942304 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542293
chr12 46941626 46941966 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542294
chr12 46941626 46942156 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542295
chr12 46941633 46942149 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542296
chr12 46941664 46941984 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542297
chr12 46941690 46942020 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542298
chr12 46941697 46942173 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542299
chr12 46941711 46943418 ZBTB33 GTRD no Brain (SK-N-SH) 108027722
chr12 46941731 46942120 ZNF143 GTRD no Epithelial (MCF-7) 21542300
chr12 46941732 46942036 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542301
chr12 46941740 46942070 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542302
chr12 46941824 46942178 ZNF274 GTRD no Liver (HepG2) 21542303
chr12 46941845 46942075 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542304
chr12 46941880 46943581 ZBTB33 GTRD no Brain (SK-N-SH) 108027723
chr12 46941880 46943581 ZBTB33 GTRD no Brain (SK-N-SH) 108027724
chr12 46941884 46942180 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21542305
Genes associated with rs2252238[chr12:46941907], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More