EnhancerDB
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  3. rs2272388[chr2:28854816]
Enhancers that have rs2272388[chr2:28854816]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2272388[chr2:28854816]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28854807 28854819 PKNOX1 JASPAR yes 72661574
chr2 28854807 28854819 TGIF1 JASPAR yes 72661575
chr2 28854807 28854819 TGIF2 JASPAR yes 72661576
chr2 28854815 28854823 FOXO3 JASPAR yes 72661577
Genes associated with rs2272388[chr2:28854816], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More