EnhancerDB
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  3. rs2277907[chr16:89371953]
Enhancers that have rs2277907[chr16:89371953]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2277907[chr16:89371953]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89369085 89371959 ZNF143 GTRD no Epithelial (MCF-7) 21738054
chr16 89369085 89371959 ZNF143 GTRD no Epithelial (MCF-7) 108225484
chr16 89369859 89372452 TCF7L2 GTRD no Colon (HCT116) 21738055
chr16 89369859 89372452 TCF7L2 GTRD no Colon (HCT116) 108225492
Genes associated with rs2277907[chr16:89371953], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More