EnhancerDB
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  3. rs2279949[chr5:169761661]
Enhancers that have rs2279949[chr5:169761661]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 169752285 169768135 enh22792
Cervix (HeLa-S3) Blood (T-cell) Esophagus Lung Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Uterus Breast Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs2279949[chr5:169761661]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 169761649 169761661 TFAP2A JASPAR yes 67686256
Genes associated with rs2279949[chr5:169761661], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr5 169673241 169725231 - LCP2 ENSG00000043462.7 169725231 36430 Heart 0.183258 5968