EnhancerDB
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  3. rs2281306[chr1:54838548]
Enhancers that have rs2281306[chr1:54838548]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54820685 54854719 enh11867
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs2281306[chr1:54838548]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54838533 54838550 RARA JASPAR yes 28979300
chr1 54838541 54838552 ESRRA JASPAR yes 28979301
chr1 54838545 54838549 LFA1 TRANSFAC yes 28979302
chr1 54838545 54838565 ESR1 JASPAR yes 28979303
Genes associated with rs2281306[chr1:54838548], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More