EnhancerDB
  1. Home
  2. SNP
  3. rs2307952[chr1:55040786]
Enhancers that have rs2307952[chr1:55040786]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2307952[chr1:55040786]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55040779 55040788 SNAI2 JASPAR yes 28994420
chr1 55040779 55040789 ID4 JASPAR yes 28994421
chr1 55040779 55040789 MSC JASPAR yes 28994422
chr1 55040779 55040789 TCF3 JASPAR yes 28994423
chr1 55040779 55040789 TCF4 JASPAR yes 28994424
chr1 55040785 55040799 TCF7L2 JASPAR yes 28994425
Genes associated with rs2307952[chr1:55040786], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More