EnhancerDB
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  3. rs2327544[chr6:12345969]
Enhancers that have rs2327544[chr6:12345969]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12340945 12361575 enh38802
Astrocyte Colon (HCT116) Pancreas Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs2327544[chr6:12345969]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12345964 12345975 FOXA1 JASPAR yes 99963619
chr6 12345965 12345976 FOXC1 JASPAR yes 99963620
chr6 12345965 12345977 FOXC2 JASPAR yes 99963621
Genes associated with rs2327544[chr6:12345969], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More