EnhancerDB
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  3. rs2327546[chr6:12353792]
Enhancers that have rs2327546[chr6:12353792]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12340945 12361575 enh38802
Astrocyte Colon (HCT116) Pancreas Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs2327546[chr6:12353792]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12353782 12353794 FOXI1 JASPAR yes 99965027
chr6 12353782 12353802 RREB1 JASPAR yes 99965028
chr6 12353785 12353797 IRF1 JASPAR yes 99965029
chr6 12353787 12353807 RREB1 JASPAR yes 99965030
chr6 12353787 12353808 IRF1 JASPAR yes 99965031
chr6 12353788 12353809 IRF1 JASPAR yes 99965032
chr6 12353792 12353806 IRF7 JASPAR yes 99965033
Genes associated with rs2327546[chr6:12353792], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More