EnhancerDB
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  3. rs2335249[chr1:154715314]
Enhancers that have rs2335249[chr1:154715314]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154711786 154726515 enh27142
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs2335249[chr1:154715314]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154715306 154715319 SMAD2 JASPAR yes 32306197
chr1 154715311 154715320 ZEB1 JASPAR yes 32306198
chr1 154715314 154715319 USF2 TRANSFAC yes 32306199
Genes associated with rs2335249[chr1:154715314], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More