EnhancerDB
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  3. rs2340009[chr5:173339855]
Enhancers that have rs2340009[chr5:173339855]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173338825 173358415 enh22829
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Esophagus Astrocyte Liver Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs2340009[chr5:173339855]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173339837 173339858 MAFG JASPAR yes 67921098
chr5 173339845 173339858 ELF1 JASPAR yes 67921099
chr5 173339853 173339861 NR4A2 JASPAR yes 67921100
Genes associated with rs2340009[chr5:173339855], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More