EnhancerDB
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  3. rs2340770[chr17:78754770]
Enhancers that have rs2340770[chr17:78754770]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs2340770[chr17:78754770]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78754343 78755003 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21797324
chr17 78754343 78755003 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108307587
chr17 78754390 78754770 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21797329
chr17 78754390 78754770 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108307592
chr17 78754761 78754774 SCRT2 JASPAR yes 56278562
chr17 78754766 78754779 ATF4 JASPAR yes 56278563
Genes associated with rs2340770[chr17:78754770], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More