EnhancerDB
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  3. rs2343816[chr17:41523385]
Enhancers that have rs2343816[chr17:41523385]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs2343816[chr17:41523385]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41519281 41523404 ZNF143 GTRD no Epithelial (MCF-7) 21760293
chr17 41520571 41526147 ZNF143 GTRD no Epithelial (MCF-7) 21760302
chr17 41520594 41525787 ZNF143 GTRD no Epithelial (MCF-7) 21760304
chr17 41520797 41523762 ZBTB33 GTRD no Lung (A549) 21760313
chr17 41520863 41526178 ZNF143 GTRD no Epithelial (MCF-7) 21760316
chr17 41523013 41524154 AR GTRD no Prostate (PC-3) 21760400
chr17 41523238 41523592 ZNF143 GTRD no Epithelial (MCF-7) 21760401
chr17 41523322 41523642 ZNF274 GTRD no Liver (HepG2) 21760402
chr17 41523363 41525123 ZNF143 GTRD no Epithelial (MCF-7) 21760403
Genes associated with rs2343816[chr17:41523385], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 41476327 41478505 + ARL4D ENSG00000175906.4 41476327 44880 Lung 0.0848885 15896