EnhancerDB
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  3. rs2364980[chr17:65438177]
Enhancers that have rs2364980[chr17:65438177]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65424869 65443995 enh17322
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2364980[chr17:65438177]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65438156 65438177 IRF1 JASPAR yes 55504785
chr17 65438170 65438182 INSM1 JASPAR yes 55504790
chr17 65438177 65438183 HiNF-A TRANSFAC yes 55504791
Genes associated with rs2364980[chr17:65438177], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 65334032 65362743 - PSMD12 ENSG00000197170.5 65362743 75434 Spleen 0.427212 16177