EnhancerDB
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  3. rs2390390[chr4:123717002]
Enhancers that have rs2390390[chr4:123717002]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 123715861 123721945 enh21761
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Liver Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs2390390[chr4:123717002]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 123716991 123717006 FOXP1 JASPAR yes 92499109
chr4 123716991 123717012 IRF1 JASPAR yes 92499110
chr4 123716992 123717013 IRF1 JASPAR yes 92499111
chr4 123716993 123717005 FOXC2 JASPAR yes 92499112
chr4 123716995 123717010 FOXP1 JASPAR yes 92499113
chr4 123716998 123717019 IRF1 JASPAR yes 92499114
chr4 123717001 123717007 TBP TRANSFAC yes 92499115
chr4 123717002 123717017 FOXP1 JASPAR yes 92499116
Genes associated with rs2390390[chr4:123717002], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More