EnhancerDB
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  3. rs2393041[chr12:116936888]
Enhancers that have rs2393041[chr12:116936888]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116926365 116948935 enh43835
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Bone (Osteoblast) Stomach Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs2393041[chr12:116936888]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116936870 116937425 ZNF143 GTRD no Epithelial (MCF-7) 21577122
chr12 116936877 116937392 ZNF143 GTRD no Epithelial (MCF-7) 21577123
chr12 116936887 116936895 HOXA5 JASPAR yes 124003141
chr12 116936888 116936898 EMX1 JASPAR yes 124003142
chr12 116936888 116936898 EMX2 JASPAR yes 124003143
chr12 116936888 116936898 EVX2 JASPAR yes 124003144
chr12 116936888 116936898 GBX1 JASPAR yes 124003145
chr12 116936888 116936898 GBX2 JASPAR yes 124003146
chr12 116936888 116936898 GSX1 JASPAR yes 124003147
chr12 116936888 116936898 HOXA2 JASPAR yes 124003148
chr12 116936888 116936898 HOXB2 JASPAR yes 124003149
chr12 116936888 116936898 HOXB3 JASPAR yes 124003150
chr12 116936888 116936898 LHX2 JASPAR yes 124003151
chr12 116936888 116936898 LHX6 JASPAR yes 124003152
chr12 116936888 116936898 MEOX1 JASPAR yes 124003153
chr12 116936888 116936898 MEOX2 JASPAR yes 124003154
chr12 116936888 116936898 NOTO JASPAR yes 124003155
chr12 116936888 116936898 POU6F1 JASPAR yes 124003156
Genes associated with rs2393041[chr12:116936888], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More