EnhancerDB
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  3. rs2399145[chr1:8535087]
Enhancers that have rs2399145[chr1:8535087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2399145[chr1:8535087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8535071 8535087 POU4F2 JASPAR yes 26559610
chr1 8535071 8535087 POU4F3 JASPAR yes 26559611
chr1 8535073 8535087 POU4F1 JASPAR yes 26559614
chr1 8535073 8535088 HNF1A JASPAR yes 26559615
chr1 8535074 8535087 HNF1B JASPAR yes 26559619
Genes associated with rs2399145[chr1:8535087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More