EnhancerDB
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  3. rs239990[chr1:201696718]
Enhancers that have rs239990[chr1:201696718]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201670008 201708415 enh12526
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs239990[chr1:201696718]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201696717 201696728 NFKB1 JASPAR yes 34525360
chr1 201696718 201696722 LFA1 TRANSFAC yes 34525361
Genes associated with rs239990[chr1:201696718], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More