EnhancerDB
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  3. rs2412412[chr15:39920140]
Enhancers that have rs2412412[chr15:39920140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39911425 39925936 enh31312
Astrocyte Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs2412412[chr15:39920140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39919223 39921651 ZNF274 GTRD no Cervix (HeLa-S3) 21649031
chr15 39919223 39921651 ZNF274 GTRD no Cervix (HeLa-S3) 108133120
chr15 39919415 39921549 TCF7L2 GTRD no Colon (HCT116) 108133121
chr15 39919496 39921512 ZNF274 GTRD no Blood (GM12878) 21649032
chr15 39919496 39921512 ZNF274 GTRD no Blood (GM12878) 108133122
chr15 39919500 39921536 ZNF274 GTRD no Liver (HepG2) 21649033
chr15 39919500 39921536 ZNF274 GTRD no Liver (HepG2) 108133123
chr15 39919537 39921542 ZBTB33 GTRD no Brain (SK-N-SH) 108133124
chr15 39919659 39921702 ZBTB33 GTRD no Lung (A549) 108133125
chr15 39919743 39921508 ZBTB33 GTRD no Brain (SK-N-SH) 108133126
chr15 39919934 39921676 ZBTB33 GTRD no Lung (A549) 108133127
chr15 39919940 39921593 ZBTB33 GTRD no Lung (A549) 108133128
chr15 39920081 39921792 ZNF143 GTRD no Epithelial (MCF-7) 21649034
chr15 39920081 39921792 ZNF143 GTRD no Epithelial (MCF-7) 108133129
chr15 39920101 39921602 ZNF274 GTRD no Cervix (HeLa-S3) 21649035
chr15 39920101 39921602 ZNF274 GTRD no Cervix (HeLa-S3) 108133130
chr15 39920135 39920155 RREB1 JASPAR yes 22903126
Genes associated with rs2412412[chr15:39920140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More