EnhancerDB
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  3. rs2412416[chr15:39921759]
Enhancers that have rs2412416[chr15:39921759]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39911425 39925936 enh31312
Astrocyte Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr15 39921500 39921920 vista19700
VISTA
Transcript factors that have rs2412416[chr15:39921759]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39920081 39921792 ZNF143 GTRD no Epithelial (MCF-7) 21649034
chr15 39920081 39921792 ZNF143 GTRD no Epithelial (MCF-7) 108133129
chr15 39920152 39921798 ZNF274 GTRD no Blood (GM12878) 21649036
chr15 39920152 39921798 ZNF274 GTRD no Blood (GM12878) 108133131
chr15 39920211 39921915 ZNF143 GTRD no Epithelial (MCF-7) 21649037
chr15 39920211 39921915 ZNF143 GTRD no Epithelial (MCF-7) 108133132
chr15 39920531 39921827 ZNF143 GTRD no Epithelial (MCF-7) 21649043
chr15 39920531 39921827 ZNF143 GTRD no Epithelial (MCF-7) 108133142
chr15 39920645 39921781 ZNF274 GTRD no Bone Marrow (K562) 108133152
chr15 39920681 39921768 ZNF274 GTRD no Cervix (HeLa-S3) 21649049
chr15 39920681 39921768 ZNF274 GTRD no Cervix (HeLa-S3) 108133156
chr15 39920762 39921807 ZNF274 GTRD no Cervix (HeLa-S3) 21649053
chr15 39920762 39921807 ZNF274 GTRD no Cervix (HeLa-S3) 108133160
chr15 39920812 39921841 ZNF274 GTRD no Liver (HepG2) 21649055
chr15 39920812 39921841 ZNF274 GTRD no Liver (HepG2) 108133164
chr15 39921399 39921919 ZNF274 GTRD no Bone Marrow (K562) 108133171
Genes associated with rs2412416[chr15:39921759], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More