EnhancerDB
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  3. rs2428350[chr17:62701306]
Enhancers that have rs2428350[chr17:62701306]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62688405 62713087 enh17300
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2428350[chr17:62701306]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 21779174
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 108282599
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 108282600
chr17 62700302 62707777 ZNF143 GTRD no Epithelial (MCF-7) 21779181
chr17 62700302 62707777 ZNF143 GTRD no Epithelial (MCF-7) 108282601
chr17 62700302 62707777 ZNF143 GTRD no Epithelial (MCF-7) 108282602
chr17 62700673 62705327 ZNF143 GTRD no Epithelial (MCF-7) 21779189
chr17 62700673 62705327 ZNF143 GTRD no Epithelial (MCF-7) 108282603
chr17 62700673 62705327 ZNF143 GTRD no Epithelial (MCF-7) 108282604
chr17 62700674 62702457 ZNF143 GTRD no Epithelial (MCF-7) 21779190
chr17 62700953 62702391 ZNF143 GTRD no Epithelial (MCF-7) 21779203
chr17 62700959 62702484 ZNF143 GTRD no Epithelial (MCF-7) 21779204
chr17 62700971 62701482 ZNF274 GTRD no Bone Marrow (K562) 21779205
chr17 62701017 62705087 TCF7L2 GTRD no Colon (HCT116) 21779206
chr17 62701017 62705087 TCF7L2 GTRD no Colon (HCT116) 108282605
chr17 62701083 62701602 ZNF274 GTRD no Bone Marrow (K562) 21779207
chr17 62701096 62701860 TCF7L2 GTRD no Colon (HCT116) 21779208
chr17 62701134 62701585 TCF7L2 GTRD no Colon (HCT116) 21779209
chr17 62701297 62701309 ZBTB7A JASPAR yes 55314243
chr17 62701298 62701314 GLIS1 JASPAR yes 55314244
Genes associated with rs2428350[chr17:62701306], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More