EnhancerDB
  1. Home
  2. SNP
  3. rs2434396[chr6:13455437]
Enhancers that have rs2434396[chr6:13455437]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13451065 13468999 enh8964
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs2434396[chr6:13455437]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13454949 13455541 GATA2 UCSC Txn Factor no Conserved 108538605
chr6 13454949 13455541 GATA2 UCSC Txn Factor no Conserved 108538606
chr6 13455161 13455471 BHLHE40 UCSC Txn Factor no Conserved 108538607
chr6 13455424 13455438 TLX1 JASPAR yes 70316116
chr6 13455424 13455438 TLX1 JASPAR yes 100033647
Genes associated with rs2434396[chr6:13455437], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More