EnhancerDB
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  3. rs2449500[chr11:19976564]
Enhancers that have rs2449500[chr11:19976564]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 19970665 19987395 enh13835
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs2449500[chr11:19976564]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 19971910 19976711 ZNF274 GTRD no Bone Marrow (K562) 107961388
chr11 19976553 19976568 SCRT1 JASPAR yes 37818821
chr11 19976554 19976566 GRHL1 JASPAR yes 37818822
chr11 19976555 19976568 SCRT2 JASPAR yes 37818823
Genes associated with rs2449500[chr11:19976564], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More