EnhancerDB
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  3. rs2471594[chr12:46941003]
Enhancers that have rs2471594[chr12:46941003]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46935165 46958895 enh14680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs2471594[chr12:46941003]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46940512 46941172 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21542282
chr12 46940731 46941051 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21542284
chr12 46940776 46941016 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21542285
chr12 46940995 46941008 NR2F1 JASPAR yes 120635997
chr12 46940998 46941006 NR4A2 JASPAR yes 120635998
Genes associated with rs2471594[chr12:46941003], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More